# Makefile for IRB Application

# Tools
LATEXMk = latexmk
PDFLATEX = pdflatex

# Directories
BUILD_DIR = build
OUT_DIR = out
APPENDIX_DIR = appendices

# Files
MAIN_SRC = irbapplication.tex
APPENDICES_SRC = $(wildcard $(APPENDIX_DIR)/*.tex)

# Targets
all: main appendices

# Build main application
main: $(MAIN_SRC)
	mkdir -p $(BUILD_DIR) $(OUT_DIR)
	$(PDFLATEX) -output-directory=$(BUILD_DIR) $(MAIN_SRC)
	mv $(BUILD_DIR)/irbapplication.pdf $(OUT_DIR)/

# Build appendices
appendices: $(APPENDICES_SRC)
	mkdir -p $(BUILD_DIR) $(OUT_DIR)
	for file in $(APPENDICES_SRC); do \
		$(PDFLATEX) -output-directory=$(BUILD_DIR) $$file; \
		mv $(BUILD_DIR)/*.pdf $(OUT_DIR)/; \
	done

# Clean build artifacts
clean:
	rm -rf $(BUILD_DIR)
	rm -f *.aux *.log *.out *.toc *.synctex.gz *.fls *.fdb_latexmk

# Clean strictly (remove output too)
distclean: clean
	rm -rf $(OUT_DIR)

.PHONY: all main appendices clean distclean