13 Commits

Include renames

Author	SHA1	Message	Date
soconnor	92ef1b7ef0	Refine background and system design chapters; enhance clarity and structure in experiment protocols and trial execution descriptions	2026-02-23 13:32:09 -05:00
soconnor	a172c6ce0a	Refine introduction and background chapters; enhance clarity and structure in system design section	2026-02-22 22:13:48 -05:00
soconnor	02c40dde96	post-m04-ch03 edits	2026-02-19 23:50:30 -05:00
soconnor	5288007c8b	ch02 - merge 2.2 and 2.3	2026-02-19 23:12:33 -05:00
soconnor	c417f22209	post-m04-ch02 edits	2026-02-19 23:11:07 -05:00
soconnor	9423fc09b6	post-m04-ch01 revisions	2026-02-19 22:48:32 -05:00
soconnor	b75f31271b	Update thesis content and improve reproducibility framework ... - Refine introduction and background chapters for clarity and coherence. - Enhance reproducibility chapter by connecting challenges to infrastructure requirements. - Add new references to support the thesis arguments. - Update .gitignore to include IDE files. - Modify hyperref package usage to hide colored boxes in the document.	2026-02-12 10:26:49 -05:00
soconnor	b29e14c054	fill chapter03 gap, write new chapter 3	2026-02-10 00:56:19 -05:00
soconnor	a9cfd1a52c	clean up background	2026-02-10 00:45:24 -05:00
soconnor	bc8e137f5b	update introduction after milestone 3	2026-02-10 00:08:57 -05:00
soconnor	9677b6d6ad	chapters 1-3 drafted again	2026-02-03 22:01:19 -05:00
soconnor	ec8bdc1f34	chapters 1-3 drafted	2026-02-03 21:59:58 -05:00
soconnor	205bfa9eb3	Initial commit	2026-02-03 10:58:04 -05:00